Search
Now showing items 1-5 of 5
Hi–C interaction graph analysis reveals the impact of histone modifications in chromatin shape
(Springer, 2021-07-17)
Chromosome conformation capture experiments such as Hi–C map the three-dimensional spatial organization of genomes in a genome-wide scale. Even though Hi–C interactions are not biased towards any of the histone modifications, ...
A comparison of topologically associating domain callers over mammals at high resolution
(BioMed Central Ltd, 2022-04-12)
Background: Topologically associating domains (TADs) are locally highly-interacting genome regions, which also play a critical role in regulating gene expression in the cell. TADs have been first identified while investigating ...
ProbC: joint modeling of epigenome and transcriptome effects in 3D genome
(BioMed Central Ltd, 2022-12)
Background: Hi-C and its high nucleosome resolution variant Micro-C provide a window into the spatial packing of a genome in 3D within the cell. Even though both techniques do not directly depend on the binding of specific ...
MOCMIN: convex inferring of modular low-rank contact networks over COVID diffusion data
(TÜBİTAK, 2022)
SEIR (which consists of susceptible, exposed, infected, and recovered states) is a common diffusion model which could model different disease propagation dynamics across various domains such as influenza and COVID diffusion. ...
Asset price and direction prediction via deep 2D transformer and convolutional neural networks
(ACM, 2022-11-02)
Artificial intelligence-based algorithmic trading has recently started to attract more attention. Among the techniques, deep learning-based methods such as transformers, convolutional neural networks, and patch embedding ...
Share this page